Proteome microarrays are high-throughput methods to investigate cellular protein interactions on a large
scale. To facilitate the data analysis of protein chips, we implemented this BAPCP (Biomarker Analysis
tool for Protein Chip Platforms) website for general users. BAPCP is a user-friendly and comprehensive
web tool integrated with standard .gpr files. It includes 7 data normalization methods and 7 quality
control/differential analysis filters for biomarker extraction between experiment groups. Two main
functions are available in BAPCP:
1. Comprehensive Protein chip data analysis
2. Chip block processing
The steps for performing these two functions in BAPCP are detailed in the "
Help" page.