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Species

Library Name

Total Reads

Unigene Number

Average Length of Unigenes(bp)

Apostasia shenzhenica

Ap_fb

52,977,780

91,487

388

Neuwiedia malipoensis

Ne_fb

52,977,780

163,824

356

Vanilla shenzhenica

Va_fb

84,345,944

486,570

217

Galeola faberi

Ga_fb

52,977,780

128,749

350

Paphiopedilum armeniacum

Pa_fb

63,011,468

121,043

357

Cypripedium singchii

Ch_fb

73,504,160

138,941

362

Habenaria delavayi

Ha_fb

72,664,184

110,940

353

Hemipilia forrestii

Hem_fb

73,144,276

113,458

343

Phalaenopsis equestris

Pe_fb

70,571,268

95,820

379

Cymbidium sinense

Cym_fb

66,096,722

111,239

367





 

Library Name

Species

Tissue

EST

 

 

AECP

P. aphrodite

protocorm

EFCP

P. equestris

mature flower bud

VFCP

P. bellina

mature flower bud without labellum

FL- cDNA

FAECPM

P. aphrodite

seed after imbibition

FPEAECP

P. aphrodite

developing seed

FEVCP

P. equestris

vegetative tissue

FCTEVCP

P. equestris

cold-treated plantlet

FPTEVCPM

P. equestris

pathogen-treated plantlet

FEICP

P. equestris

inflorescence

454

454

P.aphrodite,

P. equestris

P. bellina

mixed tissues:

Inflorescences, flower buds, leaves and roots were sampled from P.equestris.

The protocorms and the spikes were  from P. aphrodite.

The P. bellina flowers were also collected at day 5 post anthesis.

Solexa

Solexa

P. equestris

leaf


Library Name Number of Reads Number of Unigene Sequences
Sanger Sequencing


EST 10,495 9,393
FL- cDNA Libraries 30,815 13,738
Subtotal 41,310 23,131
NGS
454 206,960 43,013
Solexa 37,701,072 49,418

Subtotal

37,908,032 92,431
Total Read 37,979,342  
Unigene Database

84,617 (8,501 contigs and 76,116 singletons )